CRISPRone

CRISPRone report for GCA_004317845.1_ASM431784v1

♦ Seq 1: BIUV01000020.1 Clostridioides difficile FD228 DNA, sequence020, whole genome shotgun sequence

⇒Summary: seq-len = 59552 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 55863-56224 bp Zoom in on locus 1 x6 CRISPR array Location: 55863-56224 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 55863-56224 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 55863-56224 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: BIUV01000089.1 Clostridioides difficile FD228 DNA, sequence089, whole genome shotgun sequence

⇒Summary: seq-len = 9596 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8492-8848 bp Zoom in on locus 1 x6 CRISPR array Location: 8492-8848 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 8492-8848 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 8492-8848 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: BIUV01000003.1 Clostridioides difficile FD228 DNA, sequence003, whole genome shotgun sequence

⇒Summary: seq-len = 132802 bp; # of CRISPR array = 0; # of cas gene = 7  (type I, III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 51791-61514 bp Zoom in on locus 1 Gene: cd09641:cas3HD Type: Type-I Location: 51791-54199 bp Gene: cd09693:cas5 Type: Type-I Location: 54226-55023 bp Gene: cd09687:cas7 Type: Subtype-I-B Location: 55039-56052 bp Gene: pfam09706:cas8b2 Type: Subtype-I-B Location: 56072-57538 bp Gene: pfam01881:cas6 Type: other Location: 57543-58280 bp Gene: unk Type: unknown Location: 58594-59052 bp Gene: cas14:cas14 Type: Type-V Location: 59080-60252 bp Gene: mkCas0101:csm2gr11 Type: Subtype-III-D Location: 60405-61514 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: BIUV01000004.1 Clostridioides difficile FD228 DNA, sequence004, whole genome shotgun sequence

⇒Summary: seq-len = 110202 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 92202-92362 bp Zoom in on locus 1 x3 CRISPR array Location: 92202-92362 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 92202-92362 bp Num of repeats: 3 Spacers: s1-s2 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 92202-92362 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: BIUV01000069.1 Clostridioides difficile FD228 DNA, sequence069, whole genome shotgun sequence

⇒Summary: seq-len = 16746 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 11584-11678 bp Zoom in on locus 1 x2 CRISPR array Location: 11584-11678 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 11584-11678 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 11584-11678 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: BIUV01000044.1 Clostridioides difficile FD228 DNA, sequence044, whole genome shotgun sequence

⇒Summary: seq-len = 36246 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 17627-18246 bp Zoom in on locus 1 x10 CRISPR array Location: 17627-18246 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 17627-18246 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 17627-18246 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)