CRISPRone

CRISPRone report for GCA_004318045.1_ASM431804v1

♦ Seq 1: BIVF01000074.1 Clostridioides difficile FD238 DNA, sequence074, whole genome shotgun sequence

⇒Summary: seq-len = 18880 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 9724-11401 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: BIVF01000149.1 Clostridioides difficile FD238 DNA, sequence149, whole genome shotgun sequence

⇒Summary: seq-len = 8285 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2999-3553 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: BIVF01000146.1 Clostridioides difficile FD238 DNA, sequence146, whole genome shotgun sequence

⇒Summary: seq-len = 8447 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4871-5354 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: BIVF01000013.1 Clostridioides difficile FD238 DNA, sequence013, whole genome shotgun sequence

⇒Summary: seq-len = 52450 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3374-3796 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: BIVF01000042.1 Clostridioides difficile FD238 DNA, sequence042, whole genome shotgun sequence

⇒Summary: seq-len = 26878 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-215 bp]: array | spacers
           [Locus range 2859-3219 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: BIVF01000001.1 Clostridioides difficile FD238 DNA, sequence001, whole genome shotgun sequence

⇒Summary: seq-len = 194427 bp; # of CRISPR array = 1; # of cas gene = 4  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 113911-114471 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: BIVF01000071.1 Clostridioides difficile FD238 DNA, sequence071, whole genome shotgun sequence

⇒Summary: seq-len = 19466 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 17540-17634 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: BIVF01000029.1 Clostridioides difficile FD238 DNA, sequence029, whole genome shotgun sequence

⇒Summary: seq-len = 33258 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: BIVF01000019.1 Clostridioides difficile FD238 DNA, sequence019, whole genome shotgun sequence

⇒Summary: seq-len = 39705 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 38293-39710 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: BIVF01000044.1 Clostridioides difficile FD238 DNA, sequence044, whole genome shotgun sequence

⇒Summary: seq-len = 26366 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 277-371 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: BIVF01000065.1 Clostridioides difficile FD238 DNA, sequence065, whole genome shotgun sequence

⇒Summary: seq-len = 20905 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 20823-20918 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: BIVF01000025.1 Clostridioides difficile FD238 DNA, sequence025, whole genome shotgun sequence

⇒Summary: seq-len = 35220 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 28977-29204 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)