CRISPRone

CRISPRone report for GCA_004318725.1_ASM431872v1

♦ Seq 1: BIWN01000130.1 Clostridioides difficile FD275 DNA, sequence130, whole genome shotgun sequence

⇒Summary: seq-len = 4662 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-1531 bp Zoom in on locus 1 x24 CRISPR array Location: 0-1531 bp Num of repeats: 24 Spacers: s1-s23 CRISPR array Location: 0-1531 bp Num of repeats: 24 Spacers: s1-s23 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-1531 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: BIWN01000144.1 Clostridioides difficile FD275 DNA, sequence144, whole genome shotgun sequence

⇒Summary: seq-len = 3105 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 470-1094 bp Zoom in on locus 1 x10 CRISPR array Location: 470-1094 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 470-1094 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 470-1094 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: BIWN01000002.1 Clostridioides difficile FD275 DNA, sequence002, whole genome shotgun sequence

⇒Summary: seq-len = 128874 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 69164-77020 bp Zoom in on locus 1 Gene: mkCas0101:csm2gr11 Type: Subtype-III-D Location: 69164-70273 bp Gene: pfam01881:cas6 Type: other Location: 70531-71268 bp Gene: pfam09706:cas8b2 Type: Subtype-I-B Location: 71273-72739 bp Gene: cd09687:cas7 Type: Subtype-I-B Location: 72759-73772 bp Gene: cd09693:cas5 Type: Type-I Location: 73788-74585 bp Gene: cd09641:cas3HD Type: Type-I Location: 74612-77020 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: BIWN01000096.1 Clostridioides difficile FD275 DNA, sequence096, whole genome shotgun sequence

⇒Summary: seq-len = 11213 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 10076-11228 bp Zoom in on locus 1 x18 CRISPR array Location: 10076-11228 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 10076-11228 bp Num of repeats: 18 Spacers: s1-s17 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 10076-11228 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: BIWN01000129.1 Clostridioides difficile FD275 DNA, sequence129, whole genome shotgun sequence

⇒Summary: seq-len = 4702 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 4621-4714 bp Zoom in on locus 1 x2 CRISPR array Location: 4621-4714 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 4621-4714 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 4621-4714 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: BIWN01000024.1 Clostridioides difficile FD275 DNA, sequence024, whole genome shotgun sequence

⇒Summary: seq-len = 43022 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 32560-33249 bp Zoom in on locus 1 x11 CRISPR array Location: 32560-33249 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 32560-33249 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 32560-33249 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: BIWN01000103.1 Clostridioides difficile FD275 DNA, sequence103, whole genome shotgun sequence

⇒Summary: seq-len = 10140 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 7914-8009 bp Zoom in on locus 1 x2 CRISPR array Location: 7914-8009 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 7914-8009 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 7914-8009 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: BIWN01000031.1 Clostridioides difficile FD275 DNA, sequence031, whole genome shotgun sequence

⇒Summary: seq-len = 40652 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-872 bp Zoom in on locus 1 x14 CRISPR array Location: 0-872 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 0-872 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-872 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: BIWN01000083.1 Clostridioides difficile FD275 DNA, sequence083, whole genome shotgun sequence

⇒Summary: seq-len = 14673 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 4120-4545 bp Zoom in on locus 1 x7 CRISPR array Location: 4120-4545 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 4120-4545 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 4120-4545 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)