CRISPRone

CRISPRone report for GCA_004319045.1_ASM431904v1

♦ Seq 1: BIXD01000153.1 Clostridioides difficile FD291 DNA, sequence153, whole genome shotgun sequence

⇒Summary: seq-len = 6243 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 5336-5430 bp Zoom in on locus 1 x2 CRISPR array Location: 5336-5430 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 5336-5430 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 5336-5430 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: BIXD01000099.1 Clostridioides difficile FD291 DNA, sequence099, whole genome shotgun sequence

⇒Summary: seq-len = 14806 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3682-4833 bp Zoom in on locus 1 x18 CRISPR array Location: 3682-4833 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 3682-4833 bp Num of repeats: 18 Spacers: s1-s17 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 3682-4833 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: BIXD01000006.1 Clostridioides difficile FD291 DNA, sequence006, whole genome shotgun sequence

⇒Summary: seq-len = 67689 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 59728-60352 bp Zoom in on locus 1 x10 CRISPR array Location: 59728-60352 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 59728-60352 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 59728-60352 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: BIXD01000003.1 Clostridioides difficile FD291 DNA, sequence003, whole genome shotgun sequence

⇒Summary: seq-len = 77457 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 59456-60144 bp Zoom in on locus 1 x11 CRISPR array Location: 59456-60144 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 59456-60144 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 59456-60144 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: BIXD01000143.1 Clostridioides difficile FD291 DNA, sequence143, whole genome shotgun sequence

⇒Summary: seq-len = 8088 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-1470 bp Zoom in on locus 1 x23 CRISPR array Location: 0-1470 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 0-1470 bp Num of repeats: 23 Spacers: s1-s22 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-1470 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: BIXD01000031.1 Clostridioides difficile FD291 DNA, sequence031, whole genome shotgun sequence

⇒Summary: seq-len = 34668 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-6153 bp Zoom in on locus 1 Gene: pfam01881:cas6 Type: other Location: 3-401 bp Gene: pfam09706:cas8b2 Type: Subtype-I-B Location: 406-1872 bp Gene: cd09687:cas7 Type: Subtype-I-B Location: 1892-2905 bp Gene: cd09693:cas5 Type: Type-I Location: 2921-3718 bp Gene: cd09641:cas3HD Type: Type-I Location: 3745-6153 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: BIXD01000165.1 Clostridioides difficile FD291 DNA, sequence165, whole genome shotgun sequence

⇒Summary: seq-len = 4522 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 256-682 bp Zoom in on locus 1 x7 CRISPR array Location: 256-682 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 256-682 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 256-682 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: BIXD01000102.1 Clostridioides difficile FD291 DNA, sequence102, whole genome shotgun sequence

⇒Summary: seq-len = 13896 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8034-8982 bp Zoom in on locus 1 x15 CRISPR array Location: 8034-8982 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 8034-8982 bp Num of repeats: 15 Spacers: s1-s14 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 8034-8982 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)