CRISPRone

CRISPRone report for GCA_004319125.1_ASM431912v1

♦ Seq 1: BIXH01000044.1 Clostridioides difficile FD296 DNA, sequence044, whole genome shotgun sequence

⇒Summary: seq-len = 24462 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 704-4965 bp Zoom in on locus 1 Gene: cd09687:cas7 Type: Subtype-I-B Location: 704-1717 bp Gene: cd09693:cas5 Type: Type-I Location: 1733-2530 bp Gene: cd09641:cas3HD Type: Type-I Location: 2557-4965 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: BIXH01000167.1 Clostridioides difficile FD296 DNA, sequence167, whole genome shotgun sequence

⇒Summary: seq-len = 7881 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 6238-7819 bp Zoom in on locus 1 x7 x9 CRISPR array Location: 6238-6662 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 6238-6662 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 7264-7819 bp Num of repeats: 9 Spacers: s7-s14 CRISPR array Location: 7264-7819 bp Num of repeats: 9 Spacers: s7-s14 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 6238-6662 bp]: array | spacers
           [Locus range 7264-7819 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: BIXH01000219.1 Clostridioides difficile FD296 DNA, sequence219, whole genome shotgun sequence

⇒Summary: seq-len = 4965 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3855-4411 bp Zoom in on locus 1 x9 CRISPR array Location: 3855-4411 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 3855-4411 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 3855-4411 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: BIXH01000301.1 Clostridioides difficile FD296 DNA, sequence301, whole genome shotgun sequence

⇒Summary: seq-len = 1763 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1603-1765 bp Zoom in on locus 1 x3 CRISPR array Location: 1603-1765 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 1603-1765 bp Num of repeats: 3 Spacers: s1-s2 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1603-1765 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: BIXH01000248.1 Clostridioides difficile FD296 DNA, sequence248, whole genome shotgun sequence

⇒Summary: seq-len = 3589 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1530-1756 bp Zoom in on locus 1 x4 CRISPR array Location: 1530-1756 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 1530-1756 bp Num of repeats: 4 Spacers: s1-s3 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1530-1756 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: BIXH01000111.1 Clostridioides difficile FD296 DNA, sequence111, whole genome shotgun sequence

⇒Summary: seq-len = 13717 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 5767-6188 bp Zoom in on locus 1 x7 CRISPR array Location: 5767-6188 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 5767-6188 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 5767-6188 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: BIXH01000242.1 Clostridioides difficile FD296 DNA, sequence242, whole genome shotgun sequence

⇒Summary: seq-len = 3833 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-691 bp Zoom in on locus 1 x11 CRISPR array Location: 0-691 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 0-691 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-691 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: BIXH01000288.1 Clostridioides difficile FD296 DNA, sequence288, whole genome shotgun sequence

⇒Summary: seq-len = 2129 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-950 bp Zoom in on locus 1 x15 CRISPR array Location: 2-950 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 2-950 bp Num of repeats: 15 Spacers: s1-s14 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 2-950 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)