CRISPRone

CRISPRone report for GCA_004349785.1_ASM434978v1

♦ Seq 1: SCWI01000030.1 Pseudomonas aeruginosa strain 178 scaffold_29, whole genome shotgun sequence

⇒Summary: seq-len = 63876 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 40154-46942 bp Zoom in on locus 1 Gene: mkCas0115:csx3 Type: other Location: 40154-41185 bp Gene: unk Type: unknown Location: 41178-41495 bp Gene: unk Type: unknown Location: 41630-42520 bp Gene: pfam13280:WYL Type: other Location: 42800-43708 bp Gene: cd09696:cas3 Type: Subtype-I-U Location: 43721-46942 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SCWI01000028.1 Pseudomonas aeruginosa strain 178 scaffold_27, whole genome shotgun sequence

⇒Summary: seq-len = 66776 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 65341-66148 bp Zoom in on locus 1 x14 CRISPR array Location: 65341-66148 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 65341-66148 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 65341-66148 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)