CRISPRone

CRISPRone report for GCA_004350255.1_ASM435025v1

♦ Seq 1: SCXS01000152.1 Pseudomonas aeruginosa strain 135 scaffold_151, whole genome shotgun sequence

⇒Summary: seq-len = 14442 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 13094-13901 bp Zoom in on locus 1 x14 CRISPR array Location: 13094-13901 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 13094-13901 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 13094-13901 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SCXS01000027.1 Pseudomonas aeruginosa strain 135 scaffold_26, whole genome shotgun sequence

⇒Summary: seq-len = 55092 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 26849-33637 bp Zoom in on locus 1 Gene: cd09696:cas3 Type: Subtype-I-U Location: 26849-30070 bp Gene: pfam13280:WYL Type: other Location: 30083-30991 bp Gene: unk Type: unknown Location: 31271-32161 bp Gene: unk Type: unknown Location: 32296-32613 bp Gene: mkCas0115:csx3 Type: other Location: 32606-33637 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)