CRISPRone

CRISPRone report for GCA_004350405.1_ASM435040v1

♦ Seq 1: SCWR01000031.1 Pseudomonas aeruginosa strain 169 scaffold_30, whole genome shotgun sequence

⇒Summary: seq-len = 77750 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 29909-40049 bp Zoom in on locus 1 x10 x17 CRISPR array Location: 29909-30478 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 29909-30478 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09718:cas1 Type: universal Location: 30738-31712 bp Gene: COG1203:cas3 Type: Type-I Location: 31709-34939 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 34997-36301 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 36288-37271 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 37282-38310 bp Gene: cd09739:cas6f Type: other Location: 38314-38877 bp CRISPR array Location: 39061-40049 bp Num of repeats: 17 Spacers: s10-s25 CRISPR array Location: 39061-40049 bp Num of repeats: 17 Spacers: s10-s25 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 29909-30478 bp]: array | spacers
           [Locus range 39061-40049 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)