CRISPRone

CRISPRone report for GCA_004350615.1_ASM435061v1

♦ Seq 1: SCXU01000488.1 Pseudomonas aeruginosa strain 133 scaffold_487, whole genome shotgun sequence

⇒Summary: seq-len = 2966 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 6-273 bp Zoom in on locus 1 x5 CRISPR array Location: 6-273 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 6-273 bp Num of repeats: 5 Spacers: s1-s4 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 6-273 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SCXU01000132.1 Pseudomonas aeruginosa strain 133 scaffold_131, whole genome shotgun sequence

⇒Summary: seq-len = 13044 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 4190-12939 bp Zoom in on locus 1 x8 CRISPR array Location: 4190-4638 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 4190-4638 bp Num of repeats: 8 Spacers: s1-s7 Gene: cd09739:cas6f Type: other Location: 4800-5363 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 5367-6395 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6406-7389 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 7376-8680 bp Gene: COG1203:cas3 Type: Type-I Location: 8738-11968 bp Gene: cd09718:cas1 Type: universal Location: 11965-12939 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 4190-4638 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SCXU01000442.1 Pseudomonas aeruginosa strain 133 scaffold_441, whole genome shotgun sequence

⇒Summary: seq-len = 3727 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2882-3210 bp Zoom in on locus 1 x6 CRISPR array Location: 2882-3210 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 2882-3210 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 2882-3210 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SCXU01000326.1 Pseudomonas aeruginosa strain 133 scaffold_325, whole genome shotgun sequence

⇒Summary: seq-len = 6067 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2834-3582 bp Zoom in on locus 1 x13 CRISPR array Location: 2834-3582 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 2834-3582 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 2834-3582 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SCXU01000015.1 Pseudomonas aeruginosa strain 133 scaffold_14, whole genome shotgun sequence

⇒Summary: seq-len = 47082 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 26936-27804 bp Zoom in on locus 1 x15 CRISPR array Location: 26936-27804 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 26936-27804 bp Num of repeats: 15 Spacers: s1-s14 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 26936-27804 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)