CRISPRone

CRISPRone report for GCA_004350695.1_ASM435069v1

♦ Seq 1: SCYD01001907.1 Pseudomonas aeruginosa strain 120 scaffold_1906, whole genome shotgun sequence

⇒Summary: seq-len = 691 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 71-698 bp Zoom in on locus 1 x11 CRISPR array Location: 71-698 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 71-698 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 71-698 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SCYD01001646.1 Pseudomonas aeruginosa strain 120 scaffold_1645, whole genome shotgun sequence

⇒Summary: seq-len = 941 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 505-953 bp Zoom in on locus 1 x8 CRISPR array Location: 505-953 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 505-953 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 505-953 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SCYD01000391.1 Pseudomonas aeruginosa strain 120 scaffold_390, whole genome shotgun sequence

⇒Summary: seq-len = 3856 bp; # of CRISPR array = 0; # of cas gene = 2  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 168-3853 bp Zoom in on locus 1 Gene: cd09718:cas1 Type: universal Location: 168-1142 bp Gene: COG1203:cas3 Type: Type-I Location: 1139-3853 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SCYD01001030.1 Pseudomonas aeruginosa strain 120 scaffold_1029, whole genome shotgun sequence

⇒Summary: seq-len = 1748 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 463-1150 bp Zoom in on locus 1 x12 CRISPR array Location: 463-1150 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 463-1150 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 463-1150 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SCYD01000346.1 Pseudomonas aeruginosa strain 120 scaffold_345, whole genome shotgun sequence

⇒Summary: seq-len = 4134 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-4132 bp Zoom in on locus 1 Gene: cd09673:cas3f Type: Subtype-I-F Location: 3-440 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 498-1802 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1789-2772 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2783-3811 bp Gene: cd09739:cas6f Type: other Location: 3815-4132 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SCYD01001797.1 Pseudomonas aeruginosa strain 120 scaffold_1796, whole genome shotgun sequence

⇒Summary: seq-len = 784 bp; # of CRISPR array = 0; # of cas gene = 1  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 417-782 bp Zoom in on locus 1 Gene: cd09693:cas5 Type: Type-I Location: 417-782 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)