CRISPRone

CRISPRone report for GCA_004350795.1_ASM435079v1

♦ Seq 1: SCYF01000192.1 Pseudomonas aeruginosa strain 118 scaffold_191, whole genome shotgun sequence

⇒Summary: seq-len = 4256 bp; # of CRISPR array = 1; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 140-3135 bp Zoom in on locus 1 x22 Gene: pfam09615:cas7f Type: Subtype-I-F Location: 140-1096 bp Gene: cd09739:cas6f Type: other Location: 1100-1663 bp CRISPR array Location: 1848-3135 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 1848-3135 bp Num of repeats: 22 Spacers: s1-s21 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1848-3135 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SCYF01000969.1 Pseudomonas aeruginosa strain 118 scaffold_968, whole genome shotgun sequence

⇒Summary: seq-len = 1822 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 104-1821 bp Zoom in on locus 1 Gene: cd09718:cas1 Type: universal Location: 104-1078 bp Gene: cd09673:cas3f Type: Subtype-I-F Location: 1075-1821 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SCYF01001738.1 Pseudomonas aeruginosa strain 118 scaffold_1737, whole genome shotgun sequence

⇒Summary: seq-len = 1077 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-685 bp Zoom in on locus 1 x12 CRISPR array Location: 0-685 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 0-685 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-685 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SCYF01000372.1 Pseudomonas aeruginosa strain 118 scaffold_371, whole genome shotgun sequence

⇒Summary: seq-len = 4045 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 70-997 bp Zoom in on locus 1 x16 CRISPR array Location: 70-997 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 70-997 bp Num of repeats: 16 Spacers: s1-s15 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 70-997 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SCYF01002783.1 Pseudomonas aeruginosa strain 118 scaffold_2782, whole genome shotgun sequence

⇒Summary: seq-len = 512 bp; # of CRISPR array = 0; # of cas gene = 1  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-295 bp Zoom in on locus 1 Gene: cd09693:cas5 Type: Type-I Location: 2-295 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SCYF01002056.1 Pseudomonas aeruginosa strain 118 scaffold_2055, whole genome shotgun sequence

⇒Summary: seq-len = 878 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-875 bp Zoom in on locus 1 Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2-406 bp Gene: pfam09614:cas5f Type: Subtype-I-F Location: 393-875 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)