CRISPRone

CRISPRone report for GCA_004351055.1_ASM435105v1

♦ Seq 1: SCZQ01001607.1 Pseudomonas aeruginosa strain 52 scaffold_1606, whole genome shotgun sequence

⇒Summary: seq-len = 1086 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 49-556 bp Zoom in on locus 1 x9 CRISPR array Location: 49-556 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 49-556 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 49-556 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SCZQ01001073.1 Pseudomonas aeruginosa strain 52 scaffold_1072, whole genome shotgun sequence

⇒Summary: seq-len = 1683 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-1682 bp Zoom in on locus 1 Gene: pfam09611:cas8f Type: Subtype-I-F Location: 1-1125 bp Gene: cd09673:cas3f Type: Subtype-I-F Location: 1536-1682 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SCZQ01001145.1 Pseudomonas aeruginosa strain 52 scaffold_1144, whole genome shotgun sequence

⇒Summary: seq-len = 1579 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-1576 bp Zoom in on locus 1 Gene: cd09736:cas5f Type: Subtype-I-F Location: 1-936 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 947-1576 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SCZQ01001615.1 Pseudomonas aeruginosa strain 52 scaffold_1614, whole genome shotgun sequence

⇒Summary: seq-len = 1082 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 84-1011 bp Zoom in on locus 1 x16 CRISPR array Location: 84-1011 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 84-1011 bp Num of repeats: 16 Spacers: s1-s15 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 84-1011 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SCZQ01000131.1 Pseudomonas aeruginosa strain 52 scaffold_130, whole genome shotgun sequence

⇒Summary: seq-len = 6108 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 4146-4894 bp Zoom in on locus 1 x13 CRISPR array Location: 4146-4894 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 4146-4894 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 4146-4894 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SCZQ01001415.1 Pseudomonas aeruginosa strain 52 scaffold_1414, whole genome shotgun sequence

⇒Summary: seq-len = 1251 bp; # of CRISPR array = 0; # of cas gene = 1  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 167-1141 bp Zoom in on locus 1 Gene: cd09718:cas1 Type: universal Location: 167-1141 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SCZQ01002108.1 Pseudomonas aeruginosa strain 52 scaffold_2107, whole genome shotgun sequence

⇒Summary: seq-len = 729 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-728 bp Zoom in on locus 1 Gene: cd09739:cas6f Type: other Location: 3-566 bp Gene: cd09677:cas7f Type: Subtype-I-F Location: 570-728 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)