CRISPRone

CRISPRone report for GCA_004351305.1_ASM435130v1

♦ Seq 1: SCYP01000045.1 Pseudomonas aeruginosa strain 105 scaffold_44, whole genome shotgun sequence

⇒Summary: seq-len = 27270 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 25521-26328 bp Zoom in on locus 1 x14 CRISPR array Location: 25521-26328 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 25521-26328 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 25521-26328 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SCYP01000021.1 Pseudomonas aeruginosa strain 105 scaffold_20, whole genome shotgun sequence

⇒Summary: seq-len = 55276 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 33414-40202 bp Zoom in on locus 1 Gene: cd09696:cas3 Type: Subtype-I-U Location: 33414-36635 bp Gene: pfam13280:WYL Type: other Location: 36648-37556 bp Gene: unk Type: unknown Location: 37836-38726 bp Gene: unk Type: unknown Location: 38861-39178 bp Gene: mkCas0115:csx3 Type: other Location: 39171-40202 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)