CRISPRone

CRISPRone report for GCA_004351325.1_ASM435132v1

♦ Seq 1: SCYU01000024.1 Pseudomonas aeruginosa strain 96 scaffold_23, whole genome shotgun sequence

⇒Summary: seq-len = 84314 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 60696-67484 bp Zoom in on locus 1 Gene: mkCas0115:csx3 Type: other Location: 60696-61727 bp Gene: unk Type: unknown Location: 62172-63062 bp Gene: pfam13280:WYL Type: other Location: 63342-64250 bp Gene: cd09696:cas3 Type: Subtype-I-U Location: 64263-67484 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SCYU01000137.1 Pseudomonas aeruginosa strain 96 scaffold_136, whole genome shotgun sequence

⇒Summary: seq-len = 12390 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 11126-11933 bp Zoom in on locus 1 x14 CRISPR array Location: 11126-11933 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 11126-11933 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 11126-11933 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)