CRISPRone

CRISPRone report for GCA_004351595.1_ASM435159v1

♦ Seq 1: SCZO01001318.1 Pseudomonas aeruginosa strain 56 scaffold_1317, whole genome shotgun sequence

⇒Summary: seq-len = 1292 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 81-828 bp Zoom in on locus 1 x13 CRISPR array Location: 81-828 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 81-828 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 81-828 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SCZO01000638.1 Pseudomonas aeruginosa strain 56 scaffold_637, whole genome shotgun sequence

⇒Summary: seq-len = 2936 bp; # of CRISPR array = 0; # of cas gene = 2  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-2179 bp Zoom in on locus 1 Gene: cd09693:cas5 Type: Type-I Location: 2-379 bp Gene: unk Type: unknown Location: 413-1099 bp Gene: COG2378:WYL Type: other Location: 1208-2179 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SCZO01000106.1 Pseudomonas aeruginosa strain 56 scaffold_105, whole genome shotgun sequence

⇒Summary: seq-len = 8421 bp; # of CRISPR array = 0; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-8212 bp Zoom in on locus 1 Gene: cd09739:cas6f Type: other Location: 2-286 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 290-1318 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1329-2312 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2299-3600 bp Gene: COG1203:cas3 Type: Type-I Location: 4011-7241 bp Gene: cd09718:cas1 Type: universal Location: 7238-8212 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SCZO01000320.1 Pseudomonas aeruginosa strain 56 scaffold_319, whole genome shotgun sequence

⇒Summary: seq-len = 4827 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3190-4358 bp Zoom in on locus 1 x20 CRISPR array Location: 3190-4358 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 3190-4358 bp Num of repeats: 20 Spacers: s1-s19 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 3190-4358 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SCZO01001071.1 Pseudomonas aeruginosa strain 56 scaffold_1070, whole genome shotgun sequence

⇒Summary: seq-len = 1739 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 526-1274 bp Zoom in on locus 1 x13 CRISPR array Location: 526-1274 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 526-1274 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 526-1274 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)