CRISPRone

CRISPRone report for GCA_004352345.1_ASM435234v1

♦ Seq 1: SGCS01000034.1 Pseudomonas aeruginosa strain 51 scaffold_33, whole genome shotgun sequence

⇒Summary: seq-len = 2849 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2718-2814 bp Zoom in on locus 1 x2 CRISPR array Location: 2718-2814 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 2718-2814 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 2718-2814 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SGCS01000197.1 Pseudomonas aeruginosa strain 51 scaffold_196, whole genome shotgun sequence

⇒Summary: seq-len = 1696 bp; # of CRISPR array = 0; # of cas gene = 2  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 234-1574 bp Zoom in on locus 1 Gene: cd09725:cas2 Type: universal Location: 234-524 bp Gene: cd09721:cas1 Type: universal Location: 534-1574 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SGCS01000650.1 Pseudomonas aeruginosa strain 51 scaffold_649, whole genome shotgun sequence

⇒Summary: seq-len = 1146 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-1107 bp Zoom in on locus 1 x19 CRISPR array Location: 0-1107 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 0-1107 bp Num of repeats: 19 Spacers: s1-s18 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-1107 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SGCS01000045.1 Pseudomonas aeruginosa strain 51 scaffold_44, whole genome shotgun sequence

⇒Summary: seq-len = 4914 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-4911 bp Zoom in on locus 1 Gene: cd09637:cas4 Type: other Location: 2-520 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 539-1408 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 1420-2607 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 2846-3520 bp Gene: COG1203:cas3 Type: Type-I Location: 3571-4911 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SGCS01001372.1 Pseudomonas aeruginosa strain 51 scaffold_1371, whole genome shotgun sequence

⇒Summary: seq-len = 827 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-803 bp Zoom in on locus 1 x14 CRISPR array Location: 0-803 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 0-803 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-803 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SGCS01001085.1 Pseudomonas aeruginosa strain 51 scaffold_1084, whole genome shotgun sequence

⇒Summary: seq-len = 927 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-929 bp Zoom in on locus 1 x16 CRISPR array Location: 1-929 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 1-929 bp Num of repeats: 16 Spacers: s1-s15 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1-929 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SGCS01003001.1 Pseudomonas aeruginosa strain 51 scaffold_3000, whole genome shotgun sequence

⇒Summary: seq-len = 516 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 17-514 bp Zoom in on locus 1 x8 CRISPR array Location: 17-514 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 17-514 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 17-514 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SGCS01002897.1 Pseudomonas aeruginosa strain 51 scaffold_2896, whole genome shotgun sequence

⇒Summary: seq-len = 528 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-509 bp Zoom in on locus 1 x9 CRISPR array Location: 1-509 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 1-509 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1-509 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)