CRISPRone

CRISPRone report for GCA_004352485.1_ASM435248v1

♦ Seq 1: SGDA01001452.1 Pseudomonas aeruginosa strain 30 scaffold_1451, whole genome shotgun sequence

⇒Summary: seq-len = 580 bp; # of CRISPR array = 0; # of cas gene = 1  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-366 bp Zoom in on locus 1 Gene: COG1518:cas1 Type: universal Location: 1-366 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SGDA01000527.1 Pseudomonas aeruginosa strain 30 scaffold_526, whole genome shotgun sequence

⇒Summary: seq-len = 869 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 300-867 bp Zoom in on locus 1 x10 CRISPR array Location: 300-867 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 300-867 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 300-867 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SGDA01000158.1 Pseudomonas aeruginosa strain 30 scaffold_157, whole genome shotgun sequence

⇒Summary: seq-len = 1242 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 454-1202 bp Zoom in on locus 1 x13 CRISPR array Location: 454-1202 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 454-1202 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 454-1202 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)