CRISPRone

CRISPRone report for GCA_004352525.1_ASM435252v1

♦ Seq 1: SGDC01003223.1 Pseudomonas aeruginosa strain 12 scaffold_3222, whole genome shotgun sequence

⇒Summary: seq-len = 571 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 44-563 bp Zoom in on locus 1 x8 CRISPR array Location: 44-563 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 44-563 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 44-563 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SGDC01000425.1 Pseudomonas aeruginosa strain 12 scaffold_424, whole genome shotgun sequence

⇒Summary: seq-len = 1660 bp; # of CRISPR array = 1; # of cas gene = 2  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-1659 bp Zoom in on locus 1 x14 Gene: cd09721:cas1 Type: universal Location: 3-278 bp Gene: cd09725:cas2 Type: universal Location: 288-578 bp CRISPR array Location: 760-1659 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 760-1659 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 760-1659 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SGDC01000025.1 Pseudomonas aeruginosa strain 12 scaffold_24, whole genome shotgun sequence

⇒Summary: seq-len = 3765 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-3659 bp Zoom in on locus 1 Gene: COG1203:cas3 Type: Type-I Location: 2-1144 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 1195-1869 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 1866-3659 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SGDC01002748.1 Pseudomonas aeruginosa strain 12 scaffold_2747, whole genome shotgun sequence

⇒Summary: seq-len = 646 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-625 bp Zoom in on locus 1 x11 CRISPR array Location: 1-625 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 1-625 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1-625 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SGDC01003462.1 Pseudomonas aeruginosa strain 12 scaffold_3461, whole genome shotgun sequence

⇒Summary: seq-len = 537 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 23-350 bp Zoom in on locus 1 x6 CRISPR array Location: 23-350 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 23-350 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 23-350 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SGDC01001330.1 Pseudomonas aeruginosa strain 12 scaffold_1329, whole genome shotgun sequence

⇒Summary: seq-len = 1009 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-618 bp Zoom in on locus 1 x11 CRISPR array Location: 0-618 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 0-618 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-618 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SGDC01001602.1 Pseudomonas aeruginosa strain 12 scaffold_1601, whole genome shotgun sequence

⇒Summary: seq-len = 907 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 404-913 bp Zoom in on locus 1 x9 CRISPR array Location: 404-913 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 404-913 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 404-913 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SGDC01003356.1 Pseudomonas aeruginosa strain 12 scaffold_3355, whole genome shotgun sequence

⇒Summary: seq-len = 551 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 13-509 bp Zoom in on locus 1 x8 CRISPR array Location: 13-509 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 13-509 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 13-509 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)