CRISPRone

CRISPRone report for GCA_004369865.1_ASM436986v1

♦ Seq 1: RWKX01000040.1 Pseudomonas aeruginosa strain 22.2 IPC1606_40.1, whole genome shotgun sequence

⇒Summary: seq-len = 49631 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 615-12062 bp Zoom in on locus 1 x29 x14 CRISPR array Location: 615-2325 bp Num of repeats: 29 Spacers: s1-s28 CRISPR array Location: 615-2325 bp Num of repeats: 29 Spacers: s1-s28 Gene: cd09718:cas1 Type: universal Location: 2585-3559 bp Gene: COG1203:cas3 Type: Type-I Location: 3556-6786 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 7197-8498 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 8485-9468 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 9479-10507 bp Gene: cd09739:cas6f Type: other Location: 10511-11074 bp CRISPR array Location: 11259-12062 bp Num of repeats: 14 Spacers: s29-s41 CRISPR array Location: 11259-12062 bp Num of repeats: 14 Spacers: s29-s41 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 615-2325 bp]: array | spacers
           [Locus range 11259-12062 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWKX01000008.1 Pseudomonas aeruginosa strain 22.2 IPC1606_8.1, whole genome shotgun sequence

⇒Summary: seq-len = 290977 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 178470-179818 bp Zoom in on locus 1 x23 CRISPR array Location: 178470-179818 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 178470-179818 bp Num of repeats: 23 Spacers: s1-s22 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 178470-179818 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)