CRISPRone

CRISPRone report for GCA_004370075.1_ASM437007v1

♦ Seq 1: RWLI01000030.1 Pseudomonas aeruginosa strain 13 IPC1595_30.1, whole genome shotgun sequence

⇒Summary: seq-len = 37328 bp; # of CRISPR array = 1; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-3301 bp Zoom in on locus 1 x12 Gene: cd09736:cas5f Type: Subtype-I-F Location: 3-758 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 769-1797 bp Gene: cd09739:cas6f Type: other Location: 1801-2364 bp CRISPR array Location: 2614-3301 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 2614-3301 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2614-3301 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWLI01000029.1 Pseudomonas aeruginosa strain 13 IPC1595_29.1, whole genome shotgun sequence

⇒Summary: seq-len = 40635 bp; # of CRISPR array = 1; # of cas gene = 4  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 33478-40632 bp Zoom in on locus 1 x19 CRISPR array Location: 33478-34586 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 33478-34586 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 34846-35820 bp Gene: COG1203:cas3 Type: Type-I Location: 35817-39047 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 39105-40409 bp Gene: pfam09614:cas5f Type: Subtype-I-F Location: 40396-40632 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 33478-34586 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)