CRISPRone

CRISPRone report for GCA_004370095.1_ASM437009v1

♦ Seq 1: RWLN01000001.1 Pseudomonas aeruginosa strain 8 IPC1590_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 905417 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 406551-407600 bp Zoom in on locus 1 x18 CRISPR array Location: 406551-407600 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 406551-407600 bp Num of repeats: 18 Spacers: s1-s17 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 406551-407600 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWLN01000024.1 Pseudomonas aeruginosa strain 8 IPC1590_24.1, whole genome shotgun sequence

⇒Summary: seq-len = 68312 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 20158-30301 bp Zoom in on locus 1 x15 x12 CRISPR array Location: 20158-21028 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 20158-21028 bp Num of repeats: 15 Spacers: s1-s14 Gene: cd09718:cas1 Type: universal Location: 21290-22264 bp Gene: COG1203:cas3 Type: Type-I Location: 22261-25491 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 25549-26853 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 26840-27823 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 27834-28862 bp Gene: cd09739:cas6f Type: other Location: 28866-29429 bp CRISPR array Location: 29613-30301 bp Num of repeats: 12 Spacers: s15-s25 CRISPR array Location: 29613-30301 bp Num of repeats: 12 Spacers: s15-s25 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 20158-21028 bp]: array | spacers
           [Locus range 29613-30301 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: RWLN01000003.1 Pseudomonas aeruginosa strain 8 IPC1590_3.1, whole genome shotgun sequence

⇒Summary: seq-len = 546141 bp; # of CRISPR array = 0; # of cas gene = 2  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 498427-500629 bp Zoom in on locus 1 Gene: cd09693:cas5 Type: Type-I Location: 498427-498834 bp Gene: unk Type: unknown Location: 498862-499548 bp Gene: COG2378:WYL Type: other Location: 499658-500629 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)