CRISPRone

CRISPRone report for GCA_004370145.1_ASM437014v1

♦ Seq 1: RWLQ01000010.1 Pseudomonas aeruginosa strain 5 IPC1587_10.1, whole genome shotgun sequence

⇒Summary: seq-len = 210184 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 208921-209669 bp Zoom in on locus 1 x13 CRISPR array Location: 208921-209669 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 208921-209669 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 208921-209669 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWLQ01000022.1 Pseudomonas aeruginosa strain 5 IPC1587_22.1, whole genome shotgun sequence

⇒Summary: seq-len = 66646 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 55534-66133 bp Zoom in on locus 1 x19 x10 CRISPR array Location: 55534-56642 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 55534-56642 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09739:cas6f Type: other Location: 56825-57388 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 57392-58420 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 58431-59414 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 59401-60702 bp Gene: COG1203:cas3 Type: Type-I Location: 61113-64343 bp Gene: cd09718:cas1 Type: universal Location: 64340-65314 bp CRISPR array Location: 65566-66133 bp Num of repeats: 10 Spacers: s19-s27 CRISPR array Location: 65566-66133 bp Num of repeats: 10 Spacers: s19-s27 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 55534-56642 bp]: array | spacers
           [Locus range 65566-66133 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)