CRISPRone

CRISPRone report for GCA_004370285.1_ASM437028v1

♦ Seq 1: RWMB01000013.1 Pseudomonas aeruginosa strain 3020837212 IPC1517_13.1, whole genome shotgun sequence

⇒Summary: seq-len = 209432 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 160428-171027 bp Zoom in on locus 1 x10 x19 CRISPR array Location: 160428-160996 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 160428-160996 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09718:cas1 Type: universal Location: 161247-162221 bp Gene: COG1203:cas3 Type: Type-I Location: 162218-165448 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 165859-167160 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 167147-168130 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 168141-169169 bp Gene: cd09739:cas6f Type: other Location: 169173-169736 bp CRISPR array Location: 169920-171027 bp Num of repeats: 19 Spacers: s10-s27 CRISPR array Location: 169920-171027 bp Num of repeats: 19 Spacers: s10-s27 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 160428-160996 bp]: array | spacers
           [Locus range 169920-171027 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWMB01000005.1 Pseudomonas aeruginosa strain 3020837212 IPC1517_5.1, whole genome shotgun sequence

⇒Summary: seq-len = 763114 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 209395-210143 bp Zoom in on locus 1 x13 CRISPR array Location: 209395-210143 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 209395-210143 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 209395-210143 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)