CRISPRone

CRISPRone report for GCA_004370435.1_ASM437043v1

♦ Seq 1: RWMM01000031.1 Pseudomonas aeruginosa strain 5024382749-14 IPC1506_31.1, whole genome shotgun sequence

⇒Summary: seq-len = 95569 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 52275-63075 bp Zoom in on locus 1 x15 x23 CRISPR array Location: 52275-53143 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 52275-53143 bp Num of repeats: 15 Spacers: s1-s14 Gene: cd09739:cas6f Type: other Location: 53327-53890 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 53894-54922 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 54933-55916 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 55903-57207 bp Gene: COG1203:cas3 Type: Type-I Location: 57265-60495 bp Gene: cd09718:cas1 Type: universal Location: 60492-61466 bp CRISPR array Location: 61727-63075 bp Num of repeats: 23 Spacers: s15-s36 CRISPR array Location: 61727-63075 bp Num of repeats: 23 Spacers: s15-s36 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 52275-53143 bp]: array | spacers
           [Locus range 61727-63075 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)