CRISPRone

CRISPRone report for GCA_004370525.1_ASM437052v1

♦ Seq 1: RWMT01000021.1 Pseudomonas aeruginosa strain 9092533235 IPC1499_21.1, whole genome shotgun sequence

⇒Summary: seq-len = 121415 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 67533-79172 bp Zoom in on locus 1 x19 x33 CRISPR array Location: 67533-68641 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 67533-68641 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09739:cas6f Type: other Location: 68824-69387 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 69391-70419 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 70430-71413 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 71400-72704 bp Gene: COG1203:cas3 Type: Type-I Location: 72762-75992 bp Gene: cd09718:cas1 Type: universal Location: 75989-76963 bp CRISPR array Location: 77225-79172 bp Num of repeats: 33 Spacers: s19-s50 CRISPR array Location: 77225-79172 bp Num of repeats: 33 Spacers: s19-s50 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 67533-68641 bp]: array | spacers
           [Locus range 77225-79172 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)