CRISPRone

CRISPRone report for GCA_004370615.1_ASM437061v1

♦ Seq 1: RWMX01000015.1 Pseudomonas aeruginosa strain 4064321111 IPC1494_15.1, whole genome shotgun sequence

⇒Summary: seq-len = 107251 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 43247-53691 bp Zoom in on locus 1 x19 x12 CRISPR array Location: 43247-44355 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 43247-44355 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 44615-45589 bp Gene: COG1203:cas3 Type: Type-I Location: 45586-48816 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 48874-50178 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 50165-51148 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 51159-52187 bp Gene: cd09739:cas6f Type: other Location: 52191-52754 bp CRISPR array Location: 53004-53691 bp Num of repeats: 12 Spacers: s19-s29 CRISPR array Location: 53004-53691 bp Num of repeats: 12 Spacers: s19-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 43247-44355 bp]: array | spacers
           [Locus range 53004-53691 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)