CRISPRone

CRISPRone report for GCA_004370735.1_ASM437073v1

♦ Seq 1: RWNM01000010.1 Pseudomonas aeruginosa strain 4124363505 IPC1474_10.1, whole genome shotgun sequence

⇒Summary: seq-len = 367083 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 66379-77813 bp 2 Locus 2: 108344-115706 bp Zoom in on locus 1 x14 Zoom in on locus 2 x17 CRISPR array Location: 66379-67187 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 66379-67187 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09739:cas6f Type: other Location: 67371-67934 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 67938-68966 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 68977-69612 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 77505-77813 bp Gene: pfam09614:cas5f Type: Subtype-I-F Location: 108344-108907 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 108894-110198 bp Gene: COG1203:cas3 Type: Type-I Location: 110256-113486 bp Gene: cd09718:cas1 Type: universal Location: 113483-114457 bp CRISPR array Location: 114718-115706 bp Num of repeats: 17 Spacers: s14-s29 CRISPR array Location: 114718-115706 bp Num of repeats: 17 Spacers: s14-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 66379-67187 bp]: array | spacers
           [Locus range 114718-115706 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)