CRISPRone

CRISPRone report for GCA_004370835.1_ASM437083v1

♦ Seq 1: RWNR01000002.1 Pseudomonas aeruginosa strain 6097.1 IPC1345_2.1, whole genome shotgun sequence

⇒Summary: seq-len = 764021 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 201069-211396 bp Zoom in on locus 1 x14 x5 CRISPR array Location: 201069-201890 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 201069-201890 bp Num of repeats: 14 Spacers: s1-s13 Gene: pfam09707:cas2 Type: universal Location: 201955-202254 bp Gene: cd09719:cas1 Type: universal Location: 202251-203141 bp Gene: pfam08798:cas6e Type: other Location: 203168-203707 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 203754-204416 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 204418-205560 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 205570-206100 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 206097-207665 bp Gene: cd09641:cas3HD Type: Type-I Location: 207668-210349 bp CRISPR array Location: 211124-211396 bp Num of repeats: 5 Spacers: s14-s17 CRISPR array Location: 211124-211396 bp Num of repeats: 5 Spacers: s14-s17 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 201069-201890 bp]: array | spacers
           [Locus range 211124-211396 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWNR01000004.1 Pseudomonas aeruginosa strain 6097.1 IPC1345_4.1, whole genome shotgun sequence

⇒Summary: seq-len = 601438 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 110762-111929 bp Zoom in on locus 1 x20 CRISPR array Location: 110762-111929 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 110762-111929 bp Num of repeats: 20 Spacers: s1-s19 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 110762-111929 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)