CRISPRone

CRISPRone report for GCA_004371065.1_ASM437106v1

♦ Seq 1: RWMN01000018.1 Pseudomonas aeruginosa strain 5024382749-13 IPC1505_18.1, whole genome shotgun sequence

⇒Summary: seq-len = 80945 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38070-48870 bp Zoom in on locus 1 x15 x23 CRISPR array Location: 38070-38938 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 38070-38938 bp Num of repeats: 15 Spacers: s1-s14 Gene: cd09739:cas6f Type: other Location: 39122-39685 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39689-40717 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40728-41711 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41698-43002 bp Gene: COG1203:cas3 Type: Type-I Location: 43060-46290 bp Gene: cd09718:cas1 Type: universal Location: 46287-47261 bp CRISPR array Location: 47522-48870 bp Num of repeats: 23 Spacers: s15-s36 CRISPR array Location: 47522-48870 bp Num of repeats: 23 Spacers: s15-s36 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38070-38938 bp]: array | spacers
           [Locus range 47522-48870 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)