CRISPRone

CRISPRone report for GCA_004371095.1_ASM437109v1

♦ Seq 1: RWML01000028.1 Pseudomonas aeruginosa strain 4114358565 IPC1507_28.1, whole genome shotgun sequence

⇒Summary: seq-len = 94314 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 53488-64288 bp Zoom in on locus 1 x15 x23 CRISPR array Location: 53488-54356 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 53488-54356 bp Num of repeats: 15 Spacers: s1-s14 Gene: cd09739:cas6f Type: other Location: 54540-55103 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 55107-56135 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 56146-57129 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 57116-58420 bp Gene: COG1203:cas3 Type: Type-I Location: 58478-61708 bp Gene: cd09718:cas1 Type: universal Location: 61705-62679 bp CRISPR array Location: 62940-64288 bp Num of repeats: 23 Spacers: s15-s36 CRISPR array Location: 62940-64288 bp Num of repeats: 23 Spacers: s15-s36 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 53488-54356 bp]: array | spacers
           [Locus range 62940-64288 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)