CRISPRone

CRISPRone report for GCA_004371155.1_ASM437115v1

♦ Seq 1: RWMU01000001.1 Pseudomonas aeruginosa strain 2032935751 IPC1498_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 1947590 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 453753-464048 bp Zoom in on locus 1 x17 x11 CRISPR array Location: 453753-454757 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 453753-454757 bp Num of repeats: 17 Spacers: s1-s16 Gene: pfam09707:cas2 Type: universal Location: 454822-455121 bp Gene: cd09719:cas1 Type: universal Location: 455118-455429 bp Gene: pfam08798:cas6e Type: other Location: 455456-455995 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 456042-456704 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 456706-457848 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 457858-458388 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 458385-459953 bp Gene: cd09641:cas3HD Type: Type-I Location: 459956-462637 bp CRISPR array Location: 463410-464048 bp Num of repeats: 11 Spacers: s17-s26 CRISPR array Location: 463410-464048 bp Num of repeats: 11 Spacers: s17-s26 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 453753-454757 bp]: array | spacers
           [Locus range 463410-464048 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWMU01000013.1 Pseudomonas aeruginosa strain 2032935751 IPC1498_13.1, whole genome shotgun sequence

⇒Summary: seq-len = 82503 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 37729-48108 bp Zoom in on locus 1 x17 x14 CRISPR array Location: 37729-38717 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 37729-38717 bp Num of repeats: 17 Spacers: s1-s16 Gene: cd09739:cas6f Type: other Location: 38900-39463 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39467-40495 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40506-41489 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41476-42780 bp Gene: COG1203:cas3 Type: Type-I Location: 42838-46068 bp Gene: cd09718:cas1 Type: universal Location: 46065-47039 bp CRISPR array Location: 47300-48108 bp Num of repeats: 14 Spacers: s17-s29 CRISPR array Location: 47300-48108 bp Num of repeats: 14 Spacers: s17-s29 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 37729-38717 bp]: array | spacers
           [Locus range 47300-48108 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)