CRISPRone

CRISPRone report for GCA_004371345.1_ASM437134v1

♦ Seq 1: RWNO01000002.1 Pseudomonas aeruginosa strain 6099 IPC1348_2.1, whole genome shotgun sequence

⇒Summary: seq-len = 619617 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 53750-64261 bp Zoom in on locus 1 x13 x9 CRISPR array Location: 53750-54511 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 53750-54511 bp Num of repeats: 13 Spacers: s1-s12 Gene: pfam09707:cas2 Type: universal Location: 54576-54875 bp Gene: cd09719:cas1 Type: universal Location: 54872-55762 bp Gene: pfam08798:cas6e Type: other Location: 55789-56328 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 56375-57037 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 57039-58181 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 58191-58721 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 58718-60286 bp Gene: cd09641:cas3HD Type: Type-I Location: 60289-62970 bp CRISPR array Location: 63744-64261 bp Num of repeats: 9 Spacers: s13-s20 CRISPR array Location: 63744-64261 bp Num of repeats: 9 Spacers: s13-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 53750-54511 bp]: array | spacers
           [Locus range 63744-64261 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)