CRISPRone

CRISPRone report for GCA_004371445.1_ASM437144v1

♦ Seq 1: RWNY01000022.1 Pseudomonas aeruginosa strain 6090 IPC1337_22.1, whole genome shotgun sequence

⇒Summary: seq-len = 80137 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 33141-43101 bp Zoom in on locus 1 x12 x12 CRISPR array Location: 33141-33830 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 33141-33830 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09718:cas1 Type: universal Location: 34091-35065 bp Gene: COG1203:cas3 Type: Type-I Location: 35062-38292 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 38350-39654 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39641-40624 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 40635-41663 bp Gene: cd09739:cas6f Type: other Location: 41667-42230 bp CRISPR array Location: 42414-43101 bp Num of repeats: 12 Spacers: s12-s22 CRISPR array Location: 42414-43101 bp Num of repeats: 12 Spacers: s12-s22 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 33141-33830 bp]: array | spacers
           [Locus range 42414-43101 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)