CRISPRone

CRISPRone report for GCA_004371525.1_ASM437152v1

♦ Seq 1: RWOE01000024.1 Pseudomonas aeruginosa strain 6085 IPC1331_24.1, whole genome shotgun sequence

⇒Summary: seq-len = 84286 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 37036-47416 bp Zoom in on locus 1 x12 x19 CRISPR array Location: 37036-37724 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 37036-37724 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 37907-38470 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38474-39502 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39513-40496 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40483-41787 bp Gene: COG1203:cas3 Type: Type-I Location: 41845-45075 bp Gene: cd09718:cas1 Type: universal Location: 45072-46046 bp CRISPR array Location: 46308-47416 bp Num of repeats: 19 Spacers: s12-s29 CRISPR array Location: 46308-47416 bp Num of repeats: 19 Spacers: s12-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 37036-37724 bp]: array | spacers
           [Locus range 46308-47416 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)