CRISPRone

CRISPRone report for GCA_004371535.1_ASM437153v1

♦ Seq 1: RWOD01000001.1 Pseudomonas aeruginosa strain 6086.1 IPC1332_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 957549 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 414757-415385 bp Zoom in on locus 1 x11 CRISPR array Location: 414757-415385 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 414757-415385 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 414757-415385 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWOD01000011.1 Pseudomonas aeruginosa strain 6086.1 IPC1332_11.1, whole genome shotgun sequence

⇒Summary: seq-len = 229640 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38425-48324 bp Zoom in on locus 1 x18 x5 CRISPR array Location: 38425-39473 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 38425-39473 bp Num of repeats: 18 Spacers: s1-s17 Gene: cd09739:cas6f Type: other Location: 39657-40220 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 40224-41252 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 41263-42246 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 42233-43537 bp Gene: COG1203:cas3 Type: Type-I Location: 43595-46825 bp Gene: cd09718:cas1 Type: universal Location: 46822-47796 bp CRISPR array Location: 48057-48324 bp Num of repeats: 5 Spacers: s18-s21 CRISPR array Location: 48057-48324 bp Num of repeats: 5 Spacers: s18-s21 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38425-39473 bp]: array | spacers
           [Locus range 48057-48324 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)