CRISPRone

CRISPRone report for GCA_004371665.1_ASM437166v1

♦ Seq 1: RWOO01000008.1 Pseudomonas aeruginosa strain 5998 IPC1321_8.1, whole genome shotgun sequence

⇒Summary: seq-len = 231309 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38423-48443 bp Zoom in on locus 1 x10 x15 CRISPR array Location: 38423-38992 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 38423-38992 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09739:cas6f Type: other Location: 39176-39739 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39743-40771 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40782-41765 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41752-43056 bp Gene: COG1203:cas3 Type: Type-I Location: 43114-46344 bp Gene: cd09718:cas1 Type: universal Location: 46341-47315 bp CRISPR array Location: 47576-48443 bp Num of repeats: 15 Spacers: s10-s23 CRISPR array Location: 47576-48443 bp Num of repeats: 15 Spacers: s10-s23 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38423-38992 bp]: array | spacers
           [Locus range 47576-48443 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)