CRISPRone

CRISPRone report for GCA_004371945.1_ASM437194v1

♦ Seq 1: RWNS01000037.1 Pseudomonas aeruginosa strain 6096 IPC1343_37.1, whole genome shotgun sequence

⇒Summary: seq-len = 47769 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38541-47373 bp Zoom in on locus 1 x9 CRISPR array Location: 38541-39050 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 38541-39050 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09739:cas6f Type: other Location: 39234-39797 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39801-40829 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40840-41823 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41810-43114 bp Gene: COG1203:cas3 Type: Type-I Location: 43172-46402 bp Gene: cd09718:cas1 Type: universal Location: 46399-47373 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38541-39050 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWNS01000007.1 Pseudomonas aeruginosa strain 6096 IPC1343_7.1, whole genome shotgun sequence

⇒Summary: seq-len = 369066 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 50876-51563 bp Zoom in on locus 1 x12 CRISPR array Location: 50876-51563 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 50876-51563 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 50876-51563 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)