CRISPRone

CRISPRone report for GCA_004371975.1_ASM437197v1

♦ Seq 1: RWNV01000001.1 Pseudomonas aeruginosa strain 6092.3 IPC1340_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 940299 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 629309-640066 bp Zoom in on locus 1 x9 x17 CRISPR array Location: 629309-629826 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 629309-629826 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09641:cas3HD Type: Type-I Location: 630601-633282 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 633285-634853 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 634850-635380 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 635390-636532 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 636534-637196 bp Gene: pfam08798:cas6e Type: other Location: 637171-637782 bp Gene: cd09719:cas1 Type: universal Location: 637809-638699 bp Gene: pfam09707:cas2 Type: universal Location: 638696-638995 bp CRISPR array Location: 639060-640066 bp Num of repeats: 17 Spacers: s9-s24 CRISPR array Location: 639060-640066 bp Num of repeats: 17 Spacers: s9-s24 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 629309-629826 bp]: array | spacers
           [Locus range 639060-640066 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWNV01000002.1 Pseudomonas aeruginosa strain 6092.3 IPC1340_2.1, whole genome shotgun sequence

⇒Summary: seq-len = 932866 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 428142-428949 bp Zoom in on locus 1 x14 CRISPR array Location: 428142-428949 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 428142-428949 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 428142-428949 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)