CRISPRone

CRISPRone report for GCA_004372185.1_ASM437218v1

♦ Seq 1: RWPG01000022.1 Pseudomonas aeruginosa strain PA-CL545b IPC632_22.1, whole genome shotgun sequence

⇒Summary: seq-len = 2598 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1184-2293 bp Zoom in on locus 1 x19 CRISPR array Location: 1184-2293 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 1184-2293 bp Num of repeats: 19 Spacers: s1-s18 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1184-2293 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWPG01000014.1 Pseudomonas aeruginosa strain PA-CL545b IPC632_14.1, whole genome shotgun sequence

⇒Summary: seq-len = 193440 bp; # of CRISPR array = 0; # of cas gene = 3  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 172527-177887 bp Zoom in on locus 1 Gene: cls001593:casR Type: Type-I Location: 172527-172844 bp Gene: COG1199:DinG Type: Subtype-IV-A Location: 172956-175346 bp Gene: unk Type: unknown Location: 175372-176850 bp Gene: COG4804:PD-DExK Type: other Location: 176847-177887 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: RWPG01000015.1 Pseudomonas aeruginosa strain PA-CL545b IPC632_15.1, whole genome shotgun sequence

⇒Summary: seq-len = 72785 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 316-10151 bp Zoom in on locus 1 x5 x11 CRISPR array Location: 316-584 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 316-584 bp Num of repeats: 5 Spacers: s1-s4 Gene: cd09718:cas1 Type: universal Location: 844-1818 bp Gene: COG1203:cas3 Type: Type-I Location: 1815-5051 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5462-6763 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6750-7733 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7744-8772 bp Gene: cd09739:cas6f Type: other Location: 8776-9339 bp CRISPR array Location: 9524-10151 bp Num of repeats: 11 Spacers: s5-s14 CRISPR array Location: 9524-10151 bp Num of repeats: 11 Spacers: s5-s14 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 316-584 bp]: array | spacers
           [Locus range 9524-10151 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: RWPG01000002.1 Pseudomonas aeruginosa strain PA-CL545b IPC632_2.1, whole genome shotgun sequence

⇒Summary: seq-len = 1174369 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 415878-416625 bp Zoom in on locus 1 x13 CRISPR array Location: 415878-416625 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 415878-416625 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 415878-416625 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)