CRISPRone

CRISPRone report for GCA_004372495.1_ASM437249v1

♦ Seq 1: RWQG01000018.1 Pseudomonas aeruginosa strain PA-CL507 IPC601_18.1, whole genome shotgun sequence

⇒Summary: seq-len = 76569 bp; # of CRISPR array = 0; # of cas gene = 3  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 16846-22206 bp Zoom in on locus 1 Gene: COG4804:PD-DExK Type: other Location: 16846-17886 bp Gene: unk Type: unknown Location: 17883-19361 bp Gene: COG1199:DinG Type: Subtype-IV-A Location: 19387-21777 bp Gene: cls001593:casR Type: Type-I Location: 21889-22206 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWQG01000035.1 Pseudomonas aeruginosa strain PA-CL507 IPC601_35.1, whole genome shotgun sequence

⇒Summary: seq-len = 1724 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 300-1409 bp Zoom in on locus 1 x19 CRISPR array Location: 300-1409 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 300-1409 bp Num of repeats: 19 Spacers: s1-s18 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 300-1409 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: RWQG01000022.1 Pseudomonas aeruginosa strain PA-CL507 IPC601_22.1, whole genome shotgun sequence

⇒Summary: seq-len = 45125 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 272-10107 bp Zoom in on locus 1 x5 x11 CRISPR array Location: 272-540 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 272-540 bp Num of repeats: 5 Spacers: s1-s4 Gene: cd09718:cas1 Type: universal Location: 800-1774 bp Gene: COG1203:cas3 Type: Type-I Location: 1771-5007 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5418-6719 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6706-7689 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7700-8728 bp Gene: cd09739:cas6f Type: other Location: 8732-9295 bp CRISPR array Location: 9480-10107 bp Num of repeats: 11 Spacers: s5-s14 CRISPR array Location: 9480-10107 bp Num of repeats: 11 Spacers: s5-s14 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 272-540 bp]: array | spacers
           [Locus range 9480-10107 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: RWQG01000001.1 Pseudomonas aeruginosa strain PA-CL507 IPC601_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 1652205 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 894155-894902 bp Zoom in on locus 1 x13 CRISPR array Location: 894155-894902 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 894155-894902 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 894155-894902 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)