CRISPRone

CRISPRone report for GCA_004372815.1_ASM437281v1

♦ Seq 1: RWQA01000001.1 Pseudomonas aeruginosa strain PA-CL513 IPC607_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 1446270 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1382297-1392741 bp Zoom in on locus 1 x19 x12 CRISPR array Location: 1382297-1383405 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 1382297-1383405 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 1383665-1384639 bp Gene: COG1203:cas3 Type: Type-I Location: 1384636-1387866 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 1387924-1389228 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1389215-1390198 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1390209-1391237 bp Gene: cd09739:cas6f Type: other Location: 1391241-1391804 bp CRISPR array Location: 1392054-1392741 bp Num of repeats: 12 Spacers: s19-s29 CRISPR array Location: 1392054-1392741 bp Num of repeats: 12 Spacers: s19-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1382297-1383405 bp]: array | spacers
           [Locus range 1392054-1392741 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)