CRISPRone

CRISPRone report for GCA_004372905.1_ASM437290v1

♦ Seq 1: RWQT01000003.1 Pseudomonas aeruginosa strain 19R IPC577_3.1, whole genome shotgun sequence

⇒Summary: seq-len = 1304876 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 960003-968247 bp Zoom in on locus 1 x13 Gene: COG1203:cas3 Type: Type-I Location: 960003-961877 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 961928-962602 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 962599-964362 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 964374-965243 bp Gene: pfam01930:cas4 Type: Type-I Location: 965262-965894 bp Gene: cd09721:cas1 Type: universal Location: 965898-966938 bp Gene: cd09725:cas2 Type: universal Location: 966948-967238 bp CRISPR array Location: 967420-968247 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 967420-968247 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 967420-968247 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)