CRISPRone

CRISPRone report for GCA_004372925.1_ASM437292v1

♦ Seq 1: RWQW01000003.1 Pseudomonas aeruginosa strain PAC97A IPC184_3.1, whole genome shotgun sequence

⇒Summary: seq-len = 636323 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 326711-337768 bp Zoom in on locus 1 x20 x11 CRISPR array Location: 326711-327898 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 326711-327898 bp Num of repeats: 20 Spacers: s1-s19 Gene: pfam09707:cas2 Type: universal Location: 327963-328262 bp Gene: cd09719:cas1 Type: universal Location: 328259-329149 bp Gene: pfam08798:cas6e Type: other Location: 329176-329715 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 329762-330424 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 330426-331568 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 331578-332108 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 332105-333673 bp Gene: cd09641:cas3HD Type: Type-I Location: 333676-336357 bp CRISPR array Location: 337130-337768 bp Num of repeats: 11 Spacers: s20-s29 CRISPR array Location: 337130-337768 bp Num of repeats: 11 Spacers: s20-s29 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 326711-327898 bp]: array | spacers
           [Locus range 337130-337768 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWQW01000001.1 Pseudomonas aeruginosa strain PAC97A IPC184_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 1206784 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1205589-1206276 bp Zoom in on locus 1 x12 CRISPR array Location: 1205589-1206276 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 1205589-1206276 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1205589-1206276 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)