CRISPRone

CRISPRone report for GCA_004373075.1_ASM437307v1

♦ Seq 1: RWRE01000003.1 Pseudomonas aeruginosa strain PAC60A IPC176_3.1, whole genome shotgun sequence

⇒Summary: seq-len = 704187 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 207589-208277 bp Zoom in on locus 1 x12 CRISPR array Location: 207589-208277 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 207589-208277 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 207589-208277 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWRE01000012.1 Pseudomonas aeruginosa strain PAC60A IPC176_12.1, whole genome shotgun sequence

⇒Summary: seq-len = 226157 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 225236-225864 bp Zoom in on locus 1 x11 CRISPR array Location: 225236-225864 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 225236-225864 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 225236-225864 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: RWRE01000021.1 Pseudomonas aeruginosa strain PAC60A IPC176_21.1, whole genome shotgun sequence

⇒Summary: seq-len = 49426 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 335-10821 bp Zoom in on locus 1 x12 x15 CRISPR array Location: 335-1024 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 335-1024 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09718:cas1 Type: universal Location: 1284-2258 bp Gene: COG1203:cas3 Type: Type-I Location: 2255-5485 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5896-7197 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7184-8167 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8178-9206 bp Gene: cd09739:cas6f Type: other Location: 9210-9773 bp CRISPR array Location: 9958-10821 bp Num of repeats: 15 Spacers: s12-s25 CRISPR array Location: 9958-10821 bp Num of repeats: 15 Spacers: s12-s25 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 335-1024 bp]: array | spacers
           [Locus range 9958-10821 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)