CRISPRone

CRISPRone report for GCA_004373095.1_ASM437309v1

♦ Seq 1: RWRF01000019.1 Pseudomonas aeruginosa strain PAC127B IPC175_19.1, whole genome shotgun sequence

⇒Summary: seq-len = 71575 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 21581-32967 bp Zoom in on locus 1 x23 x19 CRISPR array Location: 21581-22930 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 21581-22930 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 23190-24164 bp Gene: COG1203:cas3 Type: Type-I Location: 24161-27391 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 27802-29103 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 29090-30073 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 30084-31112 bp Gene: cd09739:cas6f Type: other Location: 31116-31679 bp CRISPR array Location: 31864-32967 bp Num of repeats: 19 Spacers: s23-s40 CRISPR array Location: 31864-32967 bp Num of repeats: 19 Spacers: s23-s40 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 21581-22930 bp]: array | spacers
           [Locus range 31864-32967 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWRF01000001.1 Pseudomonas aeruginosa strain PAC127B IPC175_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 703263 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 207506-208194 bp Zoom in on locus 1 x12 CRISPR array Location: 207506-208194 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 207506-208194 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 207506-208194 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)