CRISPRone

CRISPRone report for GCA_004373155.1_ASM437315v1

♦ Seq 1: RWRM01000014.1 Pseudomonas aeruginosa strain PAC98A IPC168_14.1, whole genome shotgun sequence

⇒Summary: seq-len = 99317 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 59807-70778 bp Zoom in on locus 1 x26 x15 CRISPR array Location: 59807-61336 bp Num of repeats: 26 Spacers: s1-s25 CRISPR array Location: 59807-61336 bp Num of repeats: 26 Spacers: s1-s25 Gene: cd09739:cas6f Type: other Location: 61520-62083 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 62087-63115 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 63126-64109 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 64096-65400 bp Gene: COG1203:cas3 Type: Type-I Location: 65458-68688 bp Gene: cd09718:cas1 Type: universal Location: 68685-69659 bp CRISPR array Location: 69911-70778 bp Num of repeats: 15 Spacers: s26-s39 CRISPR array Location: 69911-70778 bp Num of repeats: 15 Spacers: s26-s39 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 59807-61336 bp]: array | spacers
           [Locus range 69911-70778 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWRM01000006.1 Pseudomonas aeruginosa strain PAC98A IPC168_6.1, whole genome shotgun sequence

⇒Summary: seq-len = 512490 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 18559-28630 bp Zoom in on locus 1 Gene: cd09639:cas3 Type: Type-I Location: 18559-21684 bp Gene: unk Type: unknown Location: 21948-22610 bp Gene: pfam13280:WYL Type: other Location: 22748-23623 bp Gene: unk Type: unknown Location: 23752-25503 bp Gene: cd09696:cas3 Type: Subtype-I-U Location: 25451-28630 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)