CRISPRone

CRISPRone report for GCA_004373175.1_ASM437317v1

♦ Seq 1: RWRN01000016.1 Pseudomonas aeruginosa strain PAC80A IPC167_16.1, whole genome shotgun sequence

⇒Summary: seq-len = 69718 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 21797-32175 bp Zoom in on locus 1 x16 x15 CRISPR array Location: 21797-22725 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 21797-22725 bp Num of repeats: 16 Spacers: s1-s15 Gene: cd09718:cas1 Type: universal Location: 22985-23959 bp Gene: COG1203:cas3 Type: Type-I Location: 23956-27186 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 27244-28548 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 28535-29518 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 29529-30557 bp Gene: cd09739:cas6f Type: other Location: 30561-31124 bp CRISPR array Location: 31308-32175 bp Num of repeats: 15 Spacers: s16-s29 CRISPR array Location: 31308-32175 bp Num of repeats: 15 Spacers: s16-s29 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 21797-22725 bp]: array | spacers
           [Locus range 31308-32175 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWRN01000002.1 Pseudomonas aeruginosa strain PAC80A IPC167_2.1, whole genome shotgun sequence

⇒Summary: seq-len = 850573 bp; # of CRISPR array = 1; # of cas gene = 3  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 411746-412973 bp 2 Locus 2: 843506-849552 bp Zoom in on locus 1 x21 Zoom in on locus 2 CRISPR array Location: 411746-412973 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 411746-412973 bp Num of repeats: 21 Spacers: s1-s20 Gene: cls000170:cas4 Type: Type-I Location: 843506-845050 bp Gene: unk Type: unknown Location: 846134-846313 bp Gene: pfam00078:RT Type: other Location: 847045-847761 bp Gene: unk Type: unknown Location: 847805-848470 bp Gene: unk Type: unknown Location: 848659-848967 bp Gene: pfam00078:RT Type: other Location: 849019-849552 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 411746-412973 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)