CRISPRone

CRISPRone report for GCA_004373355.1_ASM437335v1

♦ Seq 1: RWSD01000012.1 Pseudomonas aeruginosa strain PAC22A IPC150_12.1, whole genome shotgun sequence

⇒Summary: seq-len = 233317 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 182765-194752 bp Zoom in on locus 1 x24 x28 CRISPR array Location: 182765-184174 bp Num of repeats: 24 Spacers: s1-s23 CRISPR array Location: 182765-184174 bp Num of repeats: 24 Spacers: s1-s23 Gene: cd09718:cas1 Type: universal Location: 184434-185408 bp Gene: COG1203:cas3 Type: Type-I Location: 185405-188635 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 189046-190347 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 190334-191317 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 191328-192356 bp Gene: cd09739:cas6f Type: other Location: 192360-192923 bp CRISPR array Location: 193108-194752 bp Num of repeats: 28 Spacers: s24-s50 CRISPR array Location: 193108-194752 bp Num of repeats: 28 Spacers: s24-s50 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 182765-184174 bp]: array | spacers
           [Locus range 193108-194752 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWSD01000001.1 Pseudomonas aeruginosa strain PAC22A IPC150_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 811233 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 207475-208103 bp Zoom in on locus 1 x11 CRISPR array Location: 207475-208103 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 207475-208103 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 207475-208103 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)