CRISPRone

CRISPRone report for GCA_004373365.1_ASM437336v1

♦ Seq 1: RWSC01000001.1 Pseudomonas aeruginosa strain PAC84A IPC151_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 811613 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 207589-208217 bp Zoom in on locus 1 x11 CRISPR array Location: 207589-208217 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 207589-208217 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 207589-208217 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWSC01000019.1 Pseudomonas aeruginosa strain PAC84A IPC151_19.1, whole genome shotgun sequence

⇒Summary: seq-len = 72865 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 22273-34260 bp Zoom in on locus 1 x24 x28 CRISPR array Location: 22273-23682 bp Num of repeats: 24 Spacers: s1-s23 CRISPR array Location: 22273-23682 bp Num of repeats: 24 Spacers: s1-s23 Gene: cd09718:cas1 Type: universal Location: 23942-24916 bp Gene: COG1203:cas3 Type: Type-I Location: 24913-28143 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 28554-29855 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 29842-30825 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 30836-31864 bp Gene: cd09739:cas6f Type: other Location: 31868-32431 bp CRISPR array Location: 32616-34260 bp Num of repeats: 28 Spacers: s24-s50 CRISPR array Location: 32616-34260 bp Num of repeats: 28 Spacers: s24-s50 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 22273-23682 bp]: array | spacers
           [Locus range 32616-34260 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)