CRISPRone

CRISPRone report for GCA_004373505.1_ASM437350v1

♦ Seq 1: RWSM01000013.1 Pseudomonas aeruginosa strain PAC17A IPC141_13.1, whole genome shotgun sequence

⇒Summary: seq-len = 210277 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 208740-209846 bp Zoom in on locus 1 x19 CRISPR array Location: 208740-209846 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 208740-209846 bp Num of repeats: 19 Spacers: s1-s18 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 208740-209846 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWSM01000019.1 Pseudomonas aeruginosa strain PAC17A IPC141_19.1, whole genome shotgun sequence

⇒Summary: seq-len = 49500 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 710-11138 bp Zoom in on locus 1 x9 x17 CRISPR array Location: 710-1218 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 710-1218 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09718:cas1 Type: universal Location: 1478-2452 bp Gene: COG1203:cas3 Type: Type-I Location: 2449-5679 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6090-7391 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7378-8361 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8372-9400 bp Gene: cd09739:cas6f Type: other Location: 9404-9967 bp CRISPR array Location: 10151-11138 bp Num of repeats: 17 Spacers: s9-s24 CRISPR array Location: 10151-11138 bp Num of repeats: 17 Spacers: s9-s24 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 710-1218 bp]: array | spacers
           [Locus range 10151-11138 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)